Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:56525 ENSDARG00000025858

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Description

zgc:56525 [Source:ZFIN;Acc:ZDB-GENE-040426-1060]

Gene Synonyms

zgc:77193

Location

Chromosome 8: 49,092,039-49,115,695 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 198 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000032355.7	zgc:56525-201	1843	411aa	ENSDARP00000032153.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QI79	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192998.1	zgc:56525-203	5436	411aa	ENSDARP00000151371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QI79	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137960.2	zgc:56525-202	471	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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