Transcript: ENSSSCT00000017836.5 SNED1-201

Description

sushi, nidogen and EGF like domains 1 [Source:VGNC Symbol;Acc:VGNC:107172]

Location

About this transcript

This transcript has 30 exons, is annotated with 168 domains and features and is associated with 1580 variant alleles.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000076631.2	SNED1-202	8927	1413aa	ENSSSCP00000060289.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q812	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000017836.5	SNED1-201	4357	1351aa	ENSSSCP00000017355.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1SI04	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 30, Coding exons: 30, Transcript length: 4,357 bps, Translation length: 1,351 residues

Version

ENSSSCT00000017836.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 16.