GCN1 activator of EIF2AK4 [Source:VGNC Symbol;Acc:VGNC:88390]
Primary_assembly 14: 40,146,472-40,218,107 reverse strand.
This transcript has 59 exons, is annotated with 31 domains and features and is associated with 1233 variant alleles.
This transcript is a product of gene ENSSSCG00000009898.5 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000061657.3 | GCN1-205 | 8073 | 2679aa | ENSSSCP00000050596.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287B2G4 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| ENSSSCT00000010848.5 | GCN1-202 | 8528 | 2638aa | ENSSSCP00000010565.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1G771 F1RJK5 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000089362.2 | GCN1-203 | 8306 | 2563aa | ENSSSCP00000066842.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R8A8 A0A8D1Y7G1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000086424.1 | GCN1-201 | 8264 | 2553aa | ENSSSCP00000069003.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QXY5 A0A8D0VXD8 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000084620.2 | GCN1-204 | 8195 | 2526aa | ENSSSCP00000062607.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QKM0 A0A8D0VVV6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |