Transcript: ENSSSCT00000024626.4 LPIN1-201

Description

lipin 1 [Source:VGNC Symbol;Acc:VGNC:89793]

Location

About this transcript

This transcript has 21 exons, is annotated with 22 domains and features, is associated with 4398 variant alleles and maps to 23 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000066463.2	LPIN1-202	5652	943aa	ENSSSCP00000072875.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R719	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000024626.4	LPIN1-201	4311	930aa	ENSSSCP00000024656.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LKP1	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 4,311 bps, Translation length: 930 residues

Version

ENSSSCT00000024626.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.