Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LIG1 ENSSSCG00000003128

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Description

DNA ligase 1 [Source:VGNC Symbol;Acc:VGNC:89720]

Location

Primary_assembly 6: 53,620,483-53,686,562 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants), 193 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000068819.2	LIG1-203	3290	916aa	ENSSSCP00000070663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R0M7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000088405.2	LIG1-201	3613	829aa	ENSSSCP00000063056.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QFQ2	-
ENSSSCT00000087653.1	LIG1-204	3086	848aa	ENSSSCP00000062037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QEE4	-
ENSSSCT00000003469.5	LIG1-202	2989	885aa	ENSSSCP00000003386.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RL99	-

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Summary

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