Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CDH16 ENSSSCG00000022721

.

Description

cadherin 16 [Source:VGNC Symbol;Acc:VGNC:86479]

Location

Primary_assembly 6: 27,589,184-27,598,987 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 5 transcripts (splice variants), 93 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000027639.3	CDH16-204	2916	888aa	ENSSSCP00000027221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LSX8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000066312.2	CDH16-202	2824	833aa	ENSSSCP00000045957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AQ03	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000058977.2	CDH16-205	2808	852aa	ENSSSCP00000044783.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287ALK8	-
ENSSSCT00000072266.1	CDH16-203	2533	736aa	ENSSSCP00000062151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QDE3	-
ENSSSCT00000071959.1	CDH16-201	2511	753aa	ENSSSCP00000070803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R114	-

.

Summary

.

.