Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PAF1 ENSSSCG00000022442

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Description

PAF1 homolog, Paf1/RNA polymerase II complex component [Source:VGNC Symbol;Acc:VGNC:91150]

Location

Primary_assembly 6: 48,046,502-48,052,038 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 4 transcripts (splice variants) and 184 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000085478.2	PAF1-201	1728	575aa	ENSSSCP00000069295.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R544	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000073448.2	PAF1-203	2188	560aa	ENSSSCP00000064390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QQP9 A0A8D0S968	-
ENSSSCT00000090424.2	PAF1-204	2104	532aa	ENSSSCP00000065975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SW51 A0A5G2R5V9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000036353.4	PAF1-202	1719	511aa	ENSSSCP00000030019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0S658 F1SEH0	-

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Summary

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