TNF receptor superfamily member 1B [Source:VGNC Symbol;Acc:VGNC:94264]
Primary_assembly 6: 72,195,435-72,231,147 forward strand.
Sscrofa11.1:CM000817.5
This gene has 5 transcripts (splice variants), 316 orthologues and 18 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000028399.3 | TNFRSF1B-203 | 3763 | 461aa | ENSSSCP00000025907.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1W832 I3LP81 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, |
| ENSSSCT00000073647.1 | TNFRSF1B-204 | 3739 | 453aa | ENSSSCP00000069251.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1W7B7 A0A5G2QWK9 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000022767.4 | TNFRSF1B-205 | 3613 | 411aa | ENSSSCP00000024544.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A4X1W9C3 I3LKD0 | - |
| ENSSSCT00000078711.2 | TNFRSF1B-202 | 1460 | 437aa | ENSSSCP00000062243.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QDM7 A0A8D2CCJ6 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ENSSSCT00000068544.1 | TNFRSF1B-201 | 1098 | 365aa | ENSSSCP00000072363.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2RDC4 A0A8D1BV66 | - |
