Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TMCC2 ENSSSCG00000015287

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Description

transmembrane and coiled-coil domain family 2 [Source:VGNC Symbol;Acc:VGNC:94047]

Location

Primary_assembly 9: 65,924,880-65,952,596 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 4 transcripts (splice variants), 222 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000016658.5	TMCC2-204	2960	630aa	ENSSSCP00000016212.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1URB5 F1S360	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSSSCT00000102082.1	TMCC2-201	2612	523aa	ENSSSCP00000077663.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FFL8	-
ENSSSCT00000074536.1	TMCC2-202	2591	516aa	ENSSSCP00000074505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UT00 A0A5G2RAZ4	-
ENSSSCT00000068197.1	TMCC2-203	1905	471aa	ENSSSCP00000071102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UW72 A0A5G2RI09	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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