Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SHOC2 ENSSSCG00000010628

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Description

SHOC2 leucine rich repeat scaffold protein [Source:VGNC Symbol;Acc:VGNC:98318]

Location

Primary_assembly 14: 121,349,059-121,444,136 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 2 transcripts (splice variants), 204 orthologues and 33 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000059486.2	SHOC2-201	5352	582aa	ENSSSCP00000040363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B795 A0A8D1ARG5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000011624.5	SHOC2-202	3929	536aa	ENSSSCP00000011322.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1TBB7 A0A8D0N4C5	-

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Summary

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