Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GTF2I ENSSSCG00000007721

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Description

ral transcription factor IIi [Source:VGNC Symbol;Acc:VGNC:88736]

Location

Primary_assembly 3: 11,671,575-11,811,423 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 6 transcripts (splice variants), 128 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000008466.3	GTF2I-205	4539	999aa	ENSSSCP00000008247.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1AB35 F1RJL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000030268.3	GTF2I-206	4503	958aa	ENSSSCP00000025943.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1VLI8 A0A8D1E3Z3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000052444.3	GTF2I-201	4294	976aa	ENSSSCP00000051046.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B4N0	-
ENSSSCT00000067421.2	GTF2I-202	4228	954aa	ENSSSCP00000061802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QDT5	-
ENSSSCT00000080761.2	GTF2I-203	3268	964aa	ENSSSCP00000071026.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R1H2 A0A8D1VYX6	-
ENSSSCT00000031896.4	GTF2I-204	3247	957aa	ENSSSCP00000027054.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LSG1	-

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Summary

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