Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TGFBRAP1 ENSSSCG00000024636

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Description

transforming growth factor beta receptor associated protein 1 [Source:VGNC Symbol;Acc:VGNC:93934]

Location

Primary_assembly 3: 49,466,903-49,521,875 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024727.3	TGFBRAP1-202	5053	873aa	ENSSSCP00000023948.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VZN8 I3LIP2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000078192.1	TGFBRAP1-201	6492	843aa	ENSSSCP00000066481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R7A2 A0A8D1BCU0	-
ENSSSCT00000054122.2	TGFBRAP1-203	5043	859aa	ENSSSCP00000034940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZTX8 A0A4X1W0A1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data