Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PLS3 ENSSSCG00000012597

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Description

plastin 3 [Source:VGNC Symbol;Acc:VGNC:91573]

Location

Primary_assembly X: 94,885,118-94,971,659 forward strand.

Sscrofa11.1:CM000830.5

About this gene

This gene has 4 transcripts (splice variants), 263 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000033683.4	PLS3-204	3193	595aa	ENSSSCP00000029168.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1TXL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000013776.5	PLS3-203	3201	579aa	ENSSSCP00000013396.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RWT2	-
ENSSSCT00000033699.3	PLS3-202	3048	538aa	ENSSSCP00000029738.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1TXL2	-
ENSSSCT00000036629.4	PLS3-201	3046	570aa	ENSSSCP00000030249.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0MN91 K7GQS5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data