Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: STAMBPL1 ENSSSCG00000010446

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Description

STAM binding protein like 1 [Source:VGNC Symbol;Acc:VGNC:93527]

Location

Primary_assembly 14: 100,798,088-100,859,567 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 2 transcripts (splice variants), 205 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000083882.2	STAMBPL1-202	2003	436aa	ENSSSCP00000063748.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480Y3D5 A0A4X1V134	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000011431.5	STAMBPL1-201	1889	404aa	ENSSSCP00000011134.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1V450 F1SCY8	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data