Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYK ENSSSCG00000009589

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Description

spleen associated tyrosine kinase [Source:NCBI gene (formerly Entrezgene);Acc:100125540]

Location

Primary_assembly 14: 2,056,670-2,161,171 forward strand.

Sscrofa11.1:CM000825.5

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000063542.3	SYK-203	2683	628aa	ENSSSCP00000033634.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SFQ0 A0A8D0R1U8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000048684.3	SYK-202	2680	627aa	ENSSSCP00000036995.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZZ61	-
ENSSSCT00000010510.5	SYK-201	2631	605aa	ENSSSCP00000010237.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0R339 F1RN11	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data