Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDIA6 ENSSSCG00000008633

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Description

protein disulfide isomerase family A member 6 [Source:NCBI gene (formerly Entrezgene);Acc:100499564]

Gene Synonyms

pdi-p5

Location

Primary_assembly 3: 125,751,978-125,776,077 forward strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000076918.2	PDIA6-203	1874	590aa	ENSSSCP00000072769.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2R6R2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000080810.2	PDIA6-204	3244	463aa	ENSSSCP00000060405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2Q895 A0A8D0QJM3	-
ENSSSCT00000009445.5	PDIA6-201	3166	437aa	ENSSSCP00000009202.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UE23 A0A5K1UH01	-
ENSSSCT00000099202.1	PDIA6-205	3157	434aa	ENSSSCP00000076428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FC46	-
ENSSSCT00000074814.2	PDIA6-202	1761	586aa	ENSSSCP00000074234.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RA90	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data