Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
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ID History
- Gene history

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Gene: NUP107 ENSSSCG00000000486

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Description

nucleoporin 107 [Source:VGNC Symbol;Acc:VGNC:90971]

Location

Primary_assembly 5: 32,989,794-33,042,575 forward strand.

Sscrofa11.1:CM000816.5

About this gene

This gene has 4 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000070219.1	NUP107-202	5185	925aa	ENSSSCP00000062756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VXY6 A0A5G2QG47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000081999.1	NUP107-203	5107	891aa	ENSSSCP00000059940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QD19 A0A8D1IUB5	-
ENSSSCT00000087741.2	NUP107-204	4921	837aa	ENSSSCP00000066634.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QXH1	-
ENSSSCT00000000524.5	NUP107-201	2866	862aa	ENSSSCP00000000516.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0RUC6 F1SH64	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data