Transcript: ENSRNOT00000082624.2 Lrp2-201

Description

LDL receptor related protein 2 [Source:RGD Symbol;Acc:68407]

Gene Synonyms

LRP-2, gp330

Location

About this transcript

This transcript has 79 exons, is annotated with 405 domains and features, is associated with 579 variant alleles and maps to 690 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000113902.1	Lrp2-202	24683	4678aa	ENSRNOP00000080818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZRK6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000082624.2	Lrp2-201	15437	4660aa	ENSRNOP00000075159.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K9W7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 79, Coding exons: 79, Transcript length: 15,437 bps, Translation length: 4,660 residues

Version

ENSRNOT00000082624.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.