Transcript: ENSRNOT00000112080.1 Psmb3-204

Description

proteasome 20S subunit beta 3 [Source:RGD Symbol;Acc:61875]

Location

Primary_assembly 10: 82,697,425-82,703,872 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 44 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000052730.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086608.2	Psmb3-201	760	208aa	ENSRNOP00000073805.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R7U6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105409.1	Psmb3-203	2785	193aa	ENSRNOP00000087371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8D8	-
ENSRNOT00000098612.1	Psmb3-202	2072	200aa	ENSRNOP00000086857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6V1	-
ENSRNOT00000112080.1	Psmb3-204	1047	190aa	ENSRNOP00000089407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AA71	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,047 bps, Translation length: 190 residues

Version

ENSRNOT00000112080.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000112080.1 Psmb3-204

Summary

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Transcript: ENSRNOT00000112080.1 Psmb3-204

Summary

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