Transcript: ENSRNOT00000078809.2 Znf845l-ps1-201

Description

zinc finger protein 845 like, pseudogene 1 [Source:RGD Symbol;Acc:7732425]

Gene Synonyms

AABR07001910.1, LOC100910106, LOC102547235

Location

About this transcript

This transcript has 4 exons, is annotated with 122 domains and features, is associated with 274 variant alleles and maps to 31 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000078809.2	Znf845l-ps1-201	2889	790aa	ENSRNOP00000074554.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K8C6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000102546.1	Znf845l-ps1-202	3804	789aa	ENSRNOP00000083329.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZWD1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,889 bps, Translation length: 790 residues

Version

ENSRNOT00000078809.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.