Transcript: ENSRNOT00000076111.3 Pappa-201

Description

pappalysin [Source:RGD Symbol;Acc:1307742]

Gene Synonyms

LOC313262, Pappa1

Location

About this transcript

This transcript has 23 exons, is annotated with 40 domains and features, is associated with 883 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076467.3	Pappa-202	7270	1623aa	ENSRNOP00000068419.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MK86	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000076111.3	Pappa-201	5099	1502aa	ENSRNOP00000068120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJG5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 5,099 bps, Translation length: 1,502 residues

Version

ENSRNOT00000076111.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.