Transcript: ENSRNOT00000108279.1 Sort1-202

Description

sortilin 1 [Source:RGD Symbol;Acc:619999]

Gene Synonyms

NTR3, Nt3, Nts3, gp110

Location

About this transcript

This transcript has 20 exons, is annotated with 17 domains and features, is associated with 478 variant alleles and maps to 327 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108279.1	Sort1-202	6953	882aa	ENSRNOP00000082085.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6G6Z1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000049127.6	Sort1-201	6789	858aa	ENSRNOP00000051102.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QPF6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 6,953 bps, Translation length: 882 residues

Version

ENSRNOT00000108279.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.