Transcript: ENSRNOT00000044235.6 Smg7-201

Description

SMG7 nonsense mediated mRNA decay factor [Source:RGD Symbol;Acc:1310761]

Gene Synonyms

LOC360855, RGD1310761

Location

About this transcript

This transcript has 24 exons, is annotated with 26 domains and features, is associated with 96 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000092397.2	Smg7-204	5800	1187aa	ENSRNOP00000075794.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000044235.6	Smg7-201	5958	1166aa	ENSRNOP00000048900.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4ACJ3	-
ENSRNOT00000092336.2	Smg7-203	5808	1116aa	ENSRNOP00000075818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRU7	-
ENSRNOT00000092649.2	Smg7-205	5741	1156aa	ENSRNOP00000075847.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RRX2	-
ENSRNOT00000092269.2	Smg7-202	5681	1136aa	ENSRNOP00000075882.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1RS03	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 5,958 bps, Translation length: 1,166 residues

Version

ENSRNOT00000044235.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.