Transcript: ENSRNOT00000055542.4 Sox5-202

Description

SRY-box transcription factor 5 [Source:RGD Symbol;Acc:620471]

Gene Synonyms

Sox5l1

Location

About this transcript

This transcript has 15 exons, is annotated with 28 domains and features, is associated with 765 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000055542.4	Sox5-202	2809	763aa	ENSRNOP00000052404.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M8W4-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000096663.1	Sox5-204	3802	715aa	ENSRNOP00000079278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMP4	-
ENSRNOT00000020729.7	Sox5-201	3655	666aa	ENSRNOP00000020729.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M8W4-2	-
ENSRNOT00000087434.2	Sox5-203	3131	745aa	ENSRNOP00000073853.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K6K9	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 2,809 bps, Translation length: 763 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1M8W4

Version

ENSRNOT00000055542.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.