Transcript: ENSRNOT00000103945.1 Trpm5-202

Description

transient receptor potential cation channel, subfamily M, member 5 [Source:RGD Symbol;Acc:1310620]

Gene Synonyms

LOC365391

Location

About this transcript

This transcript has 26 exons, is annotated with 13 domains and features, is associated with 97 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000040850.5	Trpm5-201	3928	1187aa	ENSRNOP00000039981.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LMD7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000103945.1	Trpm5-202	3942	1164aa	ENSRNOP00000091726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AG64	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 3,942 bps, Translation length: 1,164 residues

Version

ENSRNOT00000103945.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.