Transcript: ENSRNOT00000024460.7 Ipcef1-201

Description

interaction protein for cytohesin exchange factors 1 [Source:RGD Symbol;Acc:735159]

Location

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 325 variant alleles and maps to 162 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000099396.1	Ipcef1-202	5650	433aa	ENSRNOP00000079318.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZMU6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000024460.7	Ipcef1-201	5456	410aa	ENSRNOP00000024461.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QD36	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 5,456 bps, Translation length: 410 residues

Version

ENSRNOT00000024460.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.