Transcript: ENSRNOT00000023536.7 Carf-201

Description

calcium responsive transcription factor [Source:RGD Symbol;Acc:1306822]

Gene Synonyms

Als2cr8, LOC301446

Location

About this transcript

This transcript has 15 exons, is annotated with 9 domains and features, is associated with 120 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000087194.2	Carf-202	3408	671aa	ENSRNOP00000072606.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K3E6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000023536.7	Carf-201	2447	587aa	ENSRNOP00000023536.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A7U2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 12, Transcript length: 2,447 bps, Translation length: 587 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: D4A7U2

Version

ENSRNOT00000023536.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.