Transcript: ENSRNOT00000109654.1 Casz1-204

Description

castor zinc finger 1 [Source:RGD Symbol;Acc:1563533]

Gene Synonyms

LOC313713, RGD1563533

Location

Primary_assembly 5: 159,243,995-159,393,400 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 52 domains and features, is associated with 356 variant alleles and maps to 388 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000013474.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000094206.1	Casz1-202	7774	1789aa	ENSRNOP00000091853.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000109654.1	Casz1-204	7435	1765aa	ENSRNOP00000081497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZS43	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000018000.9	Casz1-201	5118	1705aa	ENSRNOP00000018000.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M0M0	-
ENSRNOT00000103298.1	Casz1-203	3945	629aa	ENSRNOP00000079561.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZR86	-

Summary

Statistics

Exons: 21, Coding exons: 18, Transcript length: 7,435 bps, Translation length: 1,765 residues

Version

ENSRNOT00000109654.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000109654.1 Casz1-204

Summary

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Transcript: ENSRNOT00000109654.1 Casz1-204

Summary

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