Transcript: ENSRNOT00000103839.1 Nipsnap1-203

Description

nipsnap homolog 1 [Source:RGD Symbol;Acc:1310419]

Gene Synonyms

LOC360971

Location

Primary_assembly 14: 79,746,776-79,758,098 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 6 domains and features, is associated with 44 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSRNOG00000008374.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000108106.1	Nipsnap1-204	3569	314aa	ENSRNOP00000089911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALY8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000103839.1	Nipsnap1-203	2629	258aa	ENSRNOP00000083882.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZW49	-
ENSRNOT00000011158.6	Nipsnap1-201	1906	284aa	ENSRNOP00000011158.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V728	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000098065.1	Nipsnap1-202	1903	283aa	ENSRNOP00000091044.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AAU8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,629 bps, Translation length: 258 residues

Version

ENSRNOT00000103839.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSRNOT00000103839.1 Nipsnap1-203

Summary

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Transcript: ENSRNOT00000103839.1 Nipsnap1-203

Summary

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