Transcript: ENSRNOT00000105107.1 Lrp12-202

Description

LDL receptor related protein 12 [Source:RGD Symbol;Acc:1304943]

Gene Synonyms

LOC314941

Location

About this transcript

This transcript has 6 exons, is annotated with 60 domains and features, is associated with 291 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005668.6	Lrp12-201	4040	858aa	ENSRNOP00000005668.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZCF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSRNOT00000105107.1	Lrp12-202	4276	839aa	ENSRNOP00000082423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZU40	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,276 bps, Translation length: 839 residues

Version

ENSRNOT00000105107.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.