Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cttn ENSRNOG00000050994

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Description

cortactin [Source:RGD Symbol;Acc:619839]

Gene Synonyms

Cttnb, MGC93456

Location

Primary_assembly 1: 199,599,710-199,635,164 reverse strand.

mRatBN7.2:CM026974.1

About this gene

This gene has 6 transcripts (splice variants), 201 orthologues, 4 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000047669.6	Cttn-202	2916	557aa	ENSRNOP00000050255.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D3ZGE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000090375.2	Cttn-205	2957	179aa	ENSRNOP00000073253.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K514	-
ENSRNOT00000054859.6	Cttn-203	2767	509aa	ENSRNOP00000051742.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140TAH0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000028283.6	Cttn-201	2734	496aa	ENSRNOP00000028283.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2QFA3	-
ENSRNOT00000092916.2	Cttn-206	2654	472aa	ENSRNOP00000075952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2URS9	-
ENSRNOT00000079805.2	Cttn-204	2649	481aa	ENSRNOP00000072540.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R7C5	-

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Summary

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