Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: LOC500475 ENSRNOG00000024506

Description

similar to hypothetical protein 4933430I17 [Source:RGD Symbol;Acc:1563460]

Location

Primary_assembly 5: 75,971,381-76,002,176 forward strand.

mRatBN7.2:CM026978.1

About this gene

This gene has 3 transcripts (splice variants), 81 orthologues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000034978.7	LOC500475-201	2108	491aa	ENSRNOP00000035017.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PT13	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000112332.1	LOC500475-203	2967	472aa	ENSRNOP00000080296.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZPH1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000105528.1	LOC500475-202	2102	489aa	ENSRNOP00000088877.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8Y7	-

Gene: LOC500475 ENSRNOG00000024506

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: LOC500475 ENSRNOG00000024506

Summary

About Us

Get help

Our sister sites

Follow us