Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
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- Structural variants
Gene expression
Pathway
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Gene: LOC120093104 ENSRNOG00000061895

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Description

T-cell surface glycoprotein YE1/48-like [Source:RGD Symbol;Acc:41142959]

Gene Synonyms

Klra17, LOC690045

Location

Primary_assembly 4: 163,586,930-163,827,002 reverse strand.

mRatBN7.2:CM026977.1

About this gene

This gene has 3 transcripts (splice variants), 369 orthologues and 56 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086363.2	LOC120093104-203	1325	268aa	ENSRNOP00000074168.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K7E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000077637.2	LOC120093104-201	1325	268aa	ENSRNOP00000071563.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K0S4	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000081946.2	LOC120093104-202	1267	267aa	ENSRNOP00000073006.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K4E0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data