Gene: Ninl ENSRNOG00000027747

Description

ninein-like [Source:RGD Symbol;Acc:1306152]

Gene Synonyms

LOC311529, Nlp, RGD1306152

Location

Primary_assembly 3: 139,748,355-139,814,622 reverse strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 3 transcripts (splice variants), 177 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000116558.1	Ninl-203	5129	1432aa	ENSRNOP00000088771.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A773	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000068689.4	Ninl-201	5015	1394aa	ENSRNOP00000061689.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A5N1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000113209.1	Ninl-202	4847	1338aa	ENSRNOP00000087279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A2X1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,