Gene: Ythdf1 ENSRNOG00000027015

Description

YTH N(6)-methyladenosine RNA binding protein 1 [Source:RGD Symbol;Acc:1308932]

Gene Synonyms

LOC296467

Location

Primary_assembly 3: 168,024,663-168,040,172 reverse strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 3 transcripts (splice variants), 262 orthologues, 3 paralogues and is associated with 9 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000037271.5	Ythdf1-201	3160	586aa	ENSRNOP00000037700.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7F2Q6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000098734.1	Ythdf1-202	4288	567aa	ENSRNOP00000078758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZLF0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000111765.1	Ythdf1-203	3151	552aa	ENSRNOP00000093829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AL56	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,