Gene: Senp1 ENSRNOG00000022260

Description

SUMO specific peptidase 1 [Source:RGD Symbol;Acc:1310275]

Gene Synonyms

LOC103692995, LOC300193

Location

Primary_assembly 7: 129,165,774-129,221,598 reverse strand.

mRatBN7.2:CM026980.1

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues, 18 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000089425.2	Senp1-203	3579	710aa	ENSRNOP00000071957.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K1R8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000030943.7	Senp1-201	3561	645aa	ENSRNOP00000031127.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1LVT6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000080056.2	Senp1-202	3555	652aa	ENSRNOP00000069472.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2JVG1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,