Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Brca1 ENSRNOG00000020701

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Description

BRCA1, DNA repair associated [Source:RGD Symbol;Acc:2218]

Gene Synonyms

BRCA-1

Location

Primary_assembly 10: 86,418,000-86,477,304 reverse strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 2 transcripts (splice variants), 198 orthologues and is associated with 53 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000028109.4	Brca1-201	5607	1817aa	ENSRNOP00000028109.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V8S5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000083111.2	Brca1-202	6523	1801aa	ENSRNOP00000072366.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0G2K2T3	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data