Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Export data

Share this page

Bookmark this page

.

Gene: Cd9 ENSRNOG00000019556

.

Description

CD9 molecule [Source:RGD Symbol;Acc:2318]

Location

Primary_assembly 4: 158,256,328-158,289,222 reverse strand.

mRatBN7.2:CM026977.1

About this gene

This gene has 3 transcripts (splice variants), 205 orthologues, 31 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000097226.1	Cd9-202	1709	249aa	ENSRNOP00000084675.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5ZZU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000102545.1	Cd9-203	2428	229aa	ENSRNOP00000095011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ALV0	-
ENSRNOT00000026633.8	Cd9-201	1224	226aa	ENSRNOP00000026633.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B1WBM0 P40241	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Strains

.

Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

.

Personal Data