Summary
- Splice variants
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- Gene alleles
Sequence
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Comparative Genomics
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Gene: Mybbp1a ENSRNOG00000015236

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Description

MYB binding protein 1a [Source:RGD Symbol;Acc:62062]

Gene Synonyms

DBP, PIP

Location

Primary_assembly 10: 57,056,874-57,067,255 forward strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000021134.4	Mybbp1a-201	4167	1348aa	ENSRNOP00000021134.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2UJN1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSRNOT00000115329.1	Mybbp1a-202	4146	1341aa	ENSRNOP00000091724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AF11	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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