Gene: Snx12 ENSRNOG00000004036

Description

sorting nexin 12 [Source:RGD Symbol;Acc:1565585]

Gene Synonyms

LOC363478, RGD1565585

Location

Primary_assembly X: 66,227,053-66,356,950 reverse strand.

mRatBN7.2:CM026994.1

About this gene

This gene has 3 transcripts (splice variants), 215 orthologues, 16 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000076403.2	Snx12-202	2318	182aa	ENSRNOP00000068481.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MKE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000068098.4	Snx12-201	1073	170aa	ENSRNOP00000061412.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A719	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000076635.3	Snx12-203	1005	166aa	ENSRNOP00000068200.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A096MJN6	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,