Gene: Sidt1 ENSRNOG00000002013

Description

SID1 transmembrane family, member 1 [Source:RGD Symbol;Acc:1559616]

Gene Synonyms

LOC288109, Msid2

Location

Primary_assembly 11: 56,363,512-56,459,050 forward strand.

mRatBN7.2:CM026984.1

About this gene

This gene has 3 transcripts (splice variants), 138 orthologues, 1 paralogue and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000002759.8	Sidt1-201	2563	850aa	ENSRNOP00000002759.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A117	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000098261.1	Sidt1-203	3509	832aa	ENSRNOP00000085335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A153	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000095341.1	Sidt1-202	3494	827aa	ENSRNOP00000092423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ADX2	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,