Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Genetic Variation
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Gene: Ift81 ENSRNOG00000001294

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Description

intraflagellar transport 81 [Source:RGD Symbol;Acc:727862]

Gene Synonyms

Cdv-1, Cdv1

Location

Primary_assembly 12: 33,957,806-34,037,057 forward strand.

mRatBN7.2:CM026985.1

About this gene

This gene has 4 transcripts (splice variants), 216 orthologues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000110153.1	Ift81-202	2632	676aa	ENSRNOP00000088207.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5Q9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000119159.1	Ift81-204	2482	610aa	ENSRNOP00000091754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6ACP4	-
ENSRNOT00000066952.3	Ift81-201	2307	675aa	ENSRNOP00000061697.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D4A562	-
ENSRNOT00000115098.1	Ift81-203	1273	236aa	ENSRNOP00000086337.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A208	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data