Gene: Ptprc ENSRNOG00000000655

Description

protein tyrosine phosphatase, receptor type, C [Source:RGD Symbol;Acc:3451]

Gene Synonyms

CD45, L-CA, Lca, RT7, T200

Location

Primary_assembly 13: 49,596,193-49,708,692 reverse strand.

mRatBN7.2:CM026986.1

About this gene

This gene has 5 transcripts (splice variants), 163 orthologues, 36 paralogues and is associated with 17 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000064785.4	Ptprc-205	5066	1273aa	ENSRNOP00000063859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04157-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000000814.5	Ptprc-201	13951	1168aa	ENSRNOP00000000814.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04157-2	-
ENSRNOT00000029865.7	Ptprc-202	4970	1241aa	ENSRNOP00000029889.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04157-5	-
ENSRNOT00000029878.7	Ptprc-203	4940	1231aa	ENSRNOP00000030503.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04157-4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSRNOT00000060292.5	Ptprc-204	4793	1182aa	ENSRNOP00000057042.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P04157-3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,