Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cst3 ENSRNOG00000005195

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Description

cystatin C [Source:RGD Symbol;Acc:2432]

Gene Synonyms

CYSC, MGC105556

Location

Primary_assembly 3: 136,336,920-136,340,822 reverse strand.

mRatBN7.2:CM026976.1

About this gene

This gene has 2 transcripts (splice variants), 249 orthologues, 17 paralogues and is associated with 36 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000101785.1	Cst3-202	3088	195aa	ENSRNOP00000090275.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AD91	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000007175.7	Cst3-201	752	139aa	ENSRNOP00000007175.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2Q336	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data