Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Cltc ENSRNOG00000004291

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Description

clathrin heavy chain [Source:RGD Symbol;Acc:2364]

Location

Primary_assembly 10: 71,517,663-71,573,737 reverse strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 4 transcripts (splice variants), 286 orthologues, 1 paralogue and is associated with 9 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000005987.4	Cltc-201	5938	1664aa	ENSRNOP00000005987.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1M779	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSRNOT00000111406.1	Cltc-204	7863	1616aa	ENSRNOP00000086473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A5W9	-
ENSRNOT00000098805.1	Cltc-203	6350	1621aa	ENSRNOP00000077982.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5Y9U9	-
ENSRNOT00000096168.1	Cltc-202	6229	1651aa	ENSRNOP00000094065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AGZ0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data