Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Psmb3 ENSRNOG00000052730

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Description

proteasome 20S subunit beta 3 [Source:RGD Symbol;Acc:61875]

Location

Primary_assembly 10: 82,697,425-82,704,521 forward strand.

mRatBN7.2:CM026983.1

About this gene

This gene has 4 transcripts (splice variants), 157 orthologues, 24 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000086608.2	Psmb3-201	760	208aa	ENSRNOP00000073805.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8L2R7U6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSRNOT00000105409.1	Psmb3-203	2785	193aa	ENSRNOP00000087371.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A8D8	-
ENSRNOT00000098612.1	Psmb3-202	2072	200aa	ENSRNOP00000086857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6A6V1	-
ENSRNOT00000112080.1	Psmb3-204	1047	190aa	ENSRNOP00000089407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AA71	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data