Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PDE7B ENSPTRG00000018633

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Description

phosphodiesterase 7B [Source:VGNC Symbol;Acc:VGNC:3605]

Location

Chromosome 6: 139,751,796-140,109,997 forward strand.

Pan_tro_3.0:CM000320.3

About this gene

This gene has 3 transcripts (splice variants), 189 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSPTRT00000034416.5	PDE7B-202	6966	502aa	ENSPTRP00000031812.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6D2XYY9 H2QTS7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSPTRT00000109626.1	PDE7B-203	1356	451aa	ENSPTRP00000070552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3S0T2	-
ENSPTRT00000094287.1	PDE7B-201	1353	450aa	ENSPTRP00000074331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2I3SBH5 A0A6D2Y7D2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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