Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL11A1 ENSOCUG00000013367

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Description

collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]

Location

Chromosome 13: 61,054,286-61,261,797 forward strand.

OryCun2.0:CM000802.1

About this gene

This gene has 6 transcripts (splice variants), 295 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSOCUT00000060882.1	COL11A1-201	6198	1857aa	ENSOCUP00000032529.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSOCUT00000043802.1	COL11A1-202	6081	1818aa	ENSOCUP00000031365.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000013398.4	COL11A1-203	6045	1806aa	ENSOCUP00000011528.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1T5B6	-
ENSOCUT00000035979.1	COL11A1-204	5928	1767aa	ENSOCUP00000047174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000060238.1	COL11A1-205	5790	1721aa	ENSOCUP00000035709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSOCUT00000057887.1	COL11A1-206	5697	1690aa	ENSOCUP00000040883.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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