Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCN8A ENSONIG00000011915

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Description

sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]

Location

Primary_assembly LG20: 20,521,826-20,566,676 reverse strand.

O_niloticus_UMD_NMBU:CM007501.2

About this gene

This gene has 9 transcripts (splice variants), 215 orthologues and 29 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSONIT00000015013.2	SCN8A-202	5993	1942aa	ENSONIP00000015000.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3K1K5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSONIT00000061412.1	SCN8A-207	6291	1840aa	ENSONIP00000073050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000041658.1	SCN8A-208	6291	1840aa	ENSONIP00000054277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000057166.1	SCN8A-209	6168	1799aa	ENSONIP00000074259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000062333.1	SCN8A-203	5942	1925aa	ENSONIP00000058405.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000041483.1	SCN8A-204	5927	1920aa	ENSONIP00000057646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000089368.1	SCN8A-205	5927	1920aa	ENSONIP00000037466.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000070206.1	SCN8A-206	5921	1918aa	ENSONIP00000077780.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSONIT00000015014.2	SCN8A-201	5897	1910aa	ENSONIP00000015001.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3K1K6	-

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Summary

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