Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Clcn5 MGP_SPRETEiJ_G0034030

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Description

chloride channel, voltage-sensitive 5 [Source:MGI Symbol;Acc:MGI:99486]

Location

Chromosome X: 1,687,617-1,861,561 reverse strand.

SPRET_EiJ_v1:CM004104.1

About this gene

This gene has 6 transcripts (splice variants), 224 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_SPRETEiJ_T0094537.1	Clcn5-202	3051	816aa	MGP_SPRETEiJ_P0094537	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_SPRETEiJ_T0094536.1	Clcn5-201	8365	746aa	MGP_SPRETEiJ_P0094536	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0094540.1	Clcn5-205	1072	223aa	MGP_SPRETEiJ_P0094540	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_SPRETEiJ_T0094541.1	Clcn5-206	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_SPRETEiJ_T0094538.1	Clcn5-203	4748	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_SPRETEiJ_T0094539.1	Clcn5-204	2223	684aa	MGP_SPRETEiJ_P0094539	Unknown likely coding	-

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Summary

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